Publications

Selected Publications

  • Chang-Hyeock Byeon, Kasper Holst Hansen, Jasper Jeffrey, Hakan Saricayir, Maria Andreasen, Ümit Akbey* (2024) Intrinsically disordered Pseudomonas chaperone FapA slows down the fibrillation of major biofilm-forming functional amyloid FapC. The FEBS Journal, DOI: doi.org/10.1111/febs.17084
  • Chang-Hyeock Byeon, Ted KinneyHakan SaricayirSadhana SrinivasaMeghan K. Wells, Wook Kim, Ümit Akbey* (2023) Journal of Magnetic Resonance. Tapping into the native Pseudomonas Bacterial Biofilm Structure by High-Resolution Multidimensional Solid-State NMR. Journal of Magnetic Resonance, 357, 107587, DOI: 10.1016/j.jmr.2023.107587
  • Chang-Hyeock Byeon and Ümit Akbey* (2023) Solution-state NMR Assignment and Secondary Structure Analysis of the Monomeric Pseudomonas Biofilm-forming Functional Amyloid Accessory Protein FapA. Biomolecular NMR Assignment, DOI: 10.1007/s12104-023-10155-1
  • Chang-Hyeock Byeon, Pang C. Wang, In-Ja L. Byeon, Ümit Akbey* (2023) Solution-state NMR assignment and secondary structure propensity of the full length and minimalistic-truncated prefibrillar monomeric form of biofilm forming functional amyloid FapC from Pseudomonas aeruginosa. Biomolecular NMR Assignment, DOI:10.1007/s12104-023-10135-5
  • Ümit Akbey* (2023) Site-specific protein backbone deuterium 2Hα quadrupolar patterns by proton-detected quadruple-resonance 3D 2HαcαNH MAS NMR spectroscopy. Journal of Magnetic Resonance, 125, 1010861
  •  Ümit Akbey* and Maria Andreasen* (2022) Functional amyloids from bacterial biofilms – structural properties and interaction partners. Chemical Science, 13, 6457-6477
  • Ümit Akbey* (2022) Site-specific Protein Methyl Deuterium Quadrupolar Patterns by Proton detected 3D 2H13C1H MAS NMR Spectroscopy. Journal of Biomolecular NMR, 76(1-2), 23-28
  • Ümit Akbey* (2021) Dynamics of uniformly labelled solid proteins between 100 and 300 K: A 2D 2H13C MAS NMR approach. Journal of Magnetic Resonance, 327, 106974
  • Nelson Ferreira, Emil Gregersen, Zachary A. Sorrentino, Hjalte Gram, Cristine Betzer, Clara Perez-Gozalbo, Marjo Beltoja, Madhu Nagaraj, Jie Wang, Jan S. Nowak, Mingdong Dong, Daniel Otzen, Ümit Akbey, Sissel Schmidt, Morten Meyer, Marina Romero-Ramos, Benoit Giasson, Poul H. Jensen (2021) Multiple system atrophy-associated oligodendroglial protein p25 alpha stimulates formation of novel alpha-synuclein strain with enhanced neurodegenerative potential. Acta Neuropathologica 142, 1, 87-115
  • Madhu Nagaraj; Mumdooh Ahmed; Jeppe Lyngso; Brian S. Vad; Andreas Bogglid; Anne Filipsen; Jan Skov Pederson; Daniel Otzen, Ümit Akbey* (2020) Predicted Loop Regions Promote Aggregation: A Study of Amyloidogenic Domains in the Functional Amyloid FapC. JMB, 432, 7, 2232-2252
  • Anna König, Daniel Schölzel, Boran Uluca, Thibault Viennet, Ümit Akbey, Henrike Heise (2019) Hyperpolarized MAS NMR of unfolded and misfolded proteins. Solid State NMR, 98, 1-11
  • Anne Diehl, Yvette Roske, Linda Ball,  Anup Chowdhury, Mattias Hiller, Noel Moliere, Regina Kramer, Daniel Stöppler, Catherine L. Worth, Brigitte Schlegel, Martina Leidert, Nils Cremer, Natalja Erdmann, Daniel Lopez, Heike Stephanowitz, Eberhard Krause, Barth-Jan van Rossum, Peter Schmieder, Udo Heinemann, Kürşad Turgay, Ümit Akbey, Hartmut Oschkinat (2018) Structural changes of TasA in biofilm formation of Bacillus. PNAS, 27, 115 (13), 3237-3242
  • Ümit Akbey* and Hartmut Oschkinat (2016) Structural Biology Applications of Solid State MAS DNP NMR. JMR 269, 213-224
  • Frederic Mentink-Vigier, Ümit Akbey, Akiva Feintuch, Shimon Vega, Hartmut Oschkinat. (2015) Theoretical Aspects of Magic Angle Spinning – Dynamic Nuclear Polarization. Journal of Magnetic Resonance. 258, 102-120
  • Ümit Akbey, Andrew J. Nieuwkoop, Sebastian Wegner, Anja Voreck, Britta Kunert, Priyanga Bandara, Frank Engelke, Niels Chr. Nielsen, Hartmut Oschkinat (2014) Quadruple-Resonance MAS NMR Spectroscopy of Deuterated Solid Proteins. Angew. Chem. Int. Ed. 53, 2438-2442
  • Sheetal K. Jain, Anders B. Nielsen, Anja Voreck, Matthias Hiller, Britta Kunert, Matthias Ernst, Hartmut Oschkinat, Ümit Akbey*, Niels Chr. Nielsen (2014) Low-power polarization transfer between deuterons and spin-1/2 nuclei using adiabatic RESPI-RATION-CP in solid-state NMR. Phys. Chem. Chem. Phys. 16, 2827-2830
  • Ümit Akbey*, Trant Franks, Arne Linden, Marcella Orwick Rydman, Sascha Lange, Hartmut Oschkinat. (2013) Dynamic Nuclear Polarization Enhanced Solid State NMR of Proteins. Topics in Current Chemistry

* corresponding author

Full publication list @WoS & @ NIH NCBI